How to simulate occupancy spectrums (coalescence merging configurations) when required by coalescence::algorithm::simultaneous_multiple_merge. More...

Namespaces
namespace	filter_policy
	Policy classes to discard or not the low-probability spectrums (optimization)

namespace	memoize
	Utils for memoization of OccupancySpectrumDistribution objects (optimization)

namespace	sampling_policy
	What strategy to use to randomly sample occupancy spectrums (optimization)

namespace	spectrum_editor
	Policy classes to shorten spectrums (optimization)

Classes
class	OccupancySpectrum
	An occupancy spectrum as defined in Becheler & Knowles, 2020. More...

class	ProbabilityDistribution
	Occupancy spectrum distributed according to the probability function given by von Mises (1939). More...

class	Support
	Set of occupancy spectrums resulting from throwing \(n\) balls (the number of coalescing gene copies) into \(m\) urns (the number of parents). More...

Detailed Description

How to simulate occupancy spectrums (coalescence merging configurations) when required by coalescence::algorithm::simultaneous_multiple_merge.

Namespaces