Public Types
using	coord_type = Space

using	individual_type = Individual

using	locus_ID_type = typename individual_type::locus_ID_type

using	value_type = typename individual_type::allele_type::value_type

Public Member Functions
	SpatialGeneticSample (std::map< coord_type, std::vector< individual_type > > const &data)

void	add (coord_type const &x, Individual const &ind)

void	add (Individual const &ind, coord_type const &x)

auto	size (coord_type const &x) const

auto	size () const

template<typename T >
SpatialGeneticSample< coord_type, individual_type > &	reproject (T const &projection)

std::set< coord_type > const &	get_sampling_points () const

std::set< typename individual_type::locus_ID_type > const &	loci () const

std::vector< individual_type > const &	individuals_at (coord_type const &x) const

auto	nb_gene_copies_discarding_NA (locus_ID_type const &locus) const

unsigned int	allelic_richness (locus_ID_type const &locus) const

auto	frequencies_discarding_NA (locus_ID_type const &locus) const

Friends
std::ostream &	operator<< (std::ostream &os, const SpatialGeneticSample &dt)

The documentation for this class was generated from the following file:

/home/runner/work/quetzal-CoaTL/quetzal-CoaTL/src/include/quetzal/io/genetics/SpatialGeneticSample.hpp

Public Types

Public Member Functions